EnteroBase aims to establish a world-class, one-stop, user-friendly, backwards-compatible but forward-looking genome database, Enterobase – together with a set of web-based tools, EnteroBase Backend Pipeline – to enable bacteriologists to identify, analyse, quantify and visualise genomic variation

GrapeTree is a stand-alone program that provides bioinformaticians with a tool for rapidly investigating the relationships of genomes of interest by NJ or minimal spanning trees of SNPs or MLST data.

BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.