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What is Mastodon?

(Skip ahead if you know how the internet works) When I was a teenager I used to moderate a phpBB web forum that my friend had set up. It…

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How to use rMLST and its application to Acinetobacter

In the previous post , I describe rMLST ( Jolley et al. 2012 ) as a ready and able alternative for species without existing MLST schemes…

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Downloading and installing software for the rMLST comparison

These are some notes for how to install software and fetch the data required for the rMLST comparison in Acintobacter . Setting up conda…

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In support of rMLST

There is a follow up post where I dive into the usage of rMLST and apply it futher to Acinetobacter . I am a big fan of ribosomal MLST…

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Drawing phylogenetic trees with Microreact

I make a lot of phylogenetic trees, and I have used a lot of different programs. In this post, I want to show you how to get the most out of…

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